Remove all artifacts generated by scripts

Removes all output files generated by scripts in the pipeline, including intermediate files. This provides a complete clean of generated artifacts. The pipeline can be regenerated by running run() again.

Usage

clean(verbose = TRUE)

Arguments

verbose

Logical. If TRUE (default), prints progress messages to console.

Value

Character vector of file paths that were actually removed

Examples

# Copy sample project to temp directory
temp_dir <- tempfile()
dir.create(temp_dir)
sample_proj <- system.file("extdata", "sample-project", package = "bakepipe")
file.copy(sample_proj, temp_dir, recursive = TRUE)
#> [1] TRUE

# Change to the sample project directory
old_wd <- getwd()
setwd(file.path(temp_dir, "sample-project"))

# Run the pipeline first to create output files
run(verbose = FALSE)
#> [1] "processed.csv" "summary.csv"  

# Now clean up the generated files
removed_files <- clean()
#> 
#> [CLEAN] Bakepipe Clean
#>    Found 2 output files to remove
#> [RM]  processed.csv
#> [RM]  summary.csv
#> 
#> [SUMMARY]
#>    Removed 2 files
#> 
print(removed_files)
#> [1] "processed.csv" "summary.csv"  

# Restore working directory and clean up
setwd(old_wd)
unlink(temp_dir, recursive = TRUE)